Syllabus

Course Code: *Program Elective -II MTBT-115    Course Name: Protein Engineering

MODULE NO / UNIT COURSE SYLLABUS CONTENTS OF MODULE NOTES
1 Protein Structure Characterization: Introduction to protein engineering, structure and properties of amino acids, primary, secondary, tertiary and quaternary structure of proteins, analysis of protein structure by CD spectroscopy, NMR, X ray diffraction crystallography,
2 Protein Structure Prediction: Protein prediction of protein structure using bioinformatics approach, protein sequence and structure relationship, predicting the conformation of proteins from sequence data Protein Folding – Molecular Energy and Forces,
Strategies for design of novel proteins-strategies for the design of structure and function, computer methods in protein modeling, mutations and their effects on protein folding,
3 Protein Engineering Strategies and Techniques: protein engineering - methodology, application and interpretation, Directed evolution and Rational design (Computer modeling).
Protein Evolution - Cell surface and phage display technologies, Cell-free protein engineering technologies
4 Engineering the Proteins and Their Application: Effect of amino acids on structure of proteins, prediction of structure function relations of enzymes and other proteins, gene shuffling methods such as RACHITT, ITCHY, SCRATCHY
Examples of engineered proteins:, Engineering fluorescent proteins/molecular probes, Engineering multi-functional proteins, Antibody engineering
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